1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. A549

Experiment summary for ENCSR000AUE

doi:10.17989/ENCSR000AUE

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 1 hour
Biosample Type
cell line
Replication type
isogenic
Description
ChIP-seq on human A549 CTCF treated with dexamethasone at 100nM
Treatments
100 nM dexamethasone (CHEBI:41879) for 1 hour
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Bradley Bernstein, Broad
Award
U54HG004570 (Bradley Bernstein, Broad)
Project
ENCODE
Aliases
bradley-bernstein:Project Element 4235
Date submitted
November 16, 2010
Date released
August 6, 2012
Reference Epigenome
ENCSR568MFY 
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 1 hourENCBS160AAAENCAB000AXYENCLB695AKO
21Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 1 hourENCBS160AAAENCAB000AXYENCLB695AKP

Files

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