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  2. ChIP-seq
  3. Homo sapiens
  4. MCF-7

Experiment summary for ENCSR000DWH

doi:10.17989/ENCSR000DWH

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens MCF-7
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human MCF-7
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
June 25, 2011
Date released
January 17, 2012
Annotation (gkmsvm-model)
Annotation (physical modeling)
Annotation (BPNet-model)
Submitter comment
Replicate 2,1 of this experiment was previously attributed to biosample ENCBS241AAA but it has since been corrected to the current biosample. Please note that the biosample term has remain unchanged.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens MCF-7 cell lineENCBS748WROENCAB000AFPENCLB180ZCJ
21Homo sapiens MCF-7 cell lineENCBS661RDGENCAB000AFPENCLB117IDE

Files

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Output type
Replicates

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