1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. HepG2

Experiment summary for ENCSR066EBK

doi:10.17989/ENCSR066EBK

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
FOXA2
Biosample summary
Homo sapiens HepG2
Biosample Type
cell line
Replication type
isogenic
Description
FOXA2 ChIP-seq on human HepG2
Nucleic acid type
DNA
Size range
450-650

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:ChIPss-74
Date submitted
June 30, 2015
Date released
July 8, 2016
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Submitter comment
This experiment is being used in the ENCODE-DREAM Transcription Factor Binding Site Prediction Challenge (https://www.synapse.org/#!Synapse:syn6131484/wiki/400026). The files will be unavailable until after the challenge completes on 09-30-16. UPDATE: There will be a second round to the challenge that is expected to end on 01-11-2017
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag DREAM

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens HepG2 cell lineENCBS716YFXENCAB582DUMENCLB870SCL
11Homo sapiens HepG2 cell lineENCBS731WFKENCAB582DUMENCLB480XHG

Files

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Output type
Replicates

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