1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. GM23248

Experiment summary for ENCSR096KPA

doi:10.17989/ENCSR096KPA

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Biosample summary
Homo sapiens GM23248
Biosample Type
cell line
Replication type
isogenic
Nucleic acid type
DNA
Library starting quantity
4.14ng [2-1]1.5ng [1-1]
Size range
200-600
Fragmentation methods
sonication (generic)
Controls

Attribution

ENCODE3 project
Lab
Bradley Bernstein, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 1454
Date submitted
December 11, 2015
Date released
March 4, 2018
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Submitter comment
As of January 9th, 2018, this dataset has been run through the uniform processing pipeline as single-ended as opposed to natively as paired-ended to accommodate for its control alignments in control dataset, ENCSR922FLS.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens GM23248 cell lineENCBS372AAAENCAB000BKVENCLB519RSJ
11Homo sapiens GM23248 cell lineENCBS367AAAENCAB000BKVENCLB981NIP

Files

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Output type
Replicates

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