Experiment summary for ENCSR146NLL
doi:10.17989/ENCSR146NLL
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- REPIN1
- Biosample summary
- Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens REPIN1
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- eGFP-REPIN1 ChIP-seq on human HEK293 cells.
- Nucleic acid type
- DNA
- Size range
- 450-650
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE3 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG006996 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:HEK_eGFP-REPIN1_FRT_ChIP
- Date submitted
- December 5, 2014
- Date released
- March 7, 2017
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Submitter comment
- The archived libraries sequenced on HiSeq 2000 did not meet ENCODE read depth requirements. We have therefore provided more deeply sequenced data.
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens REPIN1 | ENCBS440JWN | ENCGM057AJS | ENCAB976SGG | ENCLB196JIW |
| 2 | 1 | Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens REPIN1 | ENCBS313ZXJ | ENCGM057AJS | ENCAB976SGG | ENCLB731NAM |
| 3 | 1 | Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens REPIN1 | ENCBS430QMH | ENCGM057AJS | ENCAB976SGG | ENCLB650WFT |