1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. K562

Experiment summary for ENCSR189TRZ

doi:10.17989/ENCSR189TRZ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
TCF12
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
TCF12 ChIP-seq on human K562
Nucleic acid type
DNA
Size range
450-650
Controls

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:ChIPss-358
Date submitted
April 23, 2016
Date released
July 8, 2016
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Submitter comment
This experiment is being used in the ENCODE-DREAM Transcription Factor Binding Site Prediction Challenge (https://www.synapse.org/#!Synapse:syn6131484/wiki/400026). The files will be unavailable until after the challenge completes on 09-30-16. UPDATE: There will be a second round to the challenge that is expected to end on 01-11-2017
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag DREAM

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens K562 cell lineENCBS320BULENCAB521XDPENCLB547ZUO
11Homo sapiens K562 cell lineENCBS783WYVENCAB521XDPENCLB631MXP

Files

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File format
Output type
Replicates

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