1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. liver

Experiment summary for ENCSR324RCI

doi:10.17989/ENCSR324RCI

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
FOXA1
Biosample summary
Homo sapiens liver tissue female child (4 years)
Biosample Type
tissue
Replication type
isogenic
Description
Chip-Seq on FOXA1-human
Nucleic acid type
DNA
Fragmentation methods
see document

Attribution

ENCODE3 project
Lab
Richard Myers, HAIB
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Aliases
richard-myers:SL85877-SL90894
Date submitted
September 30, 2015
Date released
June 30, 2016
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Submitter comment
This experiment is being used in the ENCODE-DREAM Transcription Factor Binding Site Prediction Challenge (https://www.synapse.org/#!Synapse:syn6131484/wiki/400026). The files will be unavailable until after the challenge completes on 09-30-16. UPDATE: There will be a second round to the challenge that is expected to end on 01-11-2017
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag DREAM

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens female child (4 years) liver tissueENCBS401URLENCAB000AGNENCLB619XUD
21Homo sapiens female child (4 years) liver tissueENCBS401URLENCAB000AGNENCLB536LGP

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