1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. GM12878

Experiment summary for ENCSR330OEO

doi:10.17989/ENCSR330OEO

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
HDAC2
Biosample summary
Homo sapiens GM12878
Biosample Type
cell line
Replication type
isogenic
Nucleic acid type
DNA
Library starting quantity
22.2ng [1-1]6.4ng [2-1]
Size range
200-600
Fragmentation methods
sonication (generic)
Controls

Attribution

ENCODE3 project
Lab
Bradley Bernstein, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 1341
Date submitted
February 26, 2016
Date released
August 12, 2017
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens GM12878 cell lineENCBS155GIMENCAB000AHIENCLB674CRX
21Homo sapiens GM12878 cell lineENCBS830FPUENCAB000AHIENCLB774RSM

Files

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Output type
Replicates

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