1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. K562

Experiment summary for ENCSR462QZZ

doi:10.17989/ENCSR462QZZ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
ZNF395
Biosample summary
Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF395
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-ZNF395 ChIP-seq on human K562
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Controls

Attribution

ENCODE3 project
Lab
Kevin White, UChicago
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
kevin-white:ZNF395_K562_CRISPR
Date submitted
March 31, 2016
Date released
December 4, 2017
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting H. sapiens ZNF395ENCBS819JKSENCGM446NKUENCAB728YTOENCLB551NZK
31Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting H. sapiens ZNF395ENCBS366PAPENCGM446NKUENCAB728YTOENCLB458AQJ

Files

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