Experiment summary for ENCSR617IFZ
doi:10.17989/ENCSR617IFZ
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCF
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- eGFP-CTCF ChIP-seq on human HEK293 cells.
- Nucleic acid type
- DNA
- Size range
- 450-650
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE3 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG006996 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:HEK_eGFP-CTCF_FRT_ChIP
- Date submitted
- March 31, 2016
- Date released
- October 7, 2016
- Reference Epigenome
- ENCSR372WXC
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Tags
- Registry of cCREs
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 2 | 1 | Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCF | ENCBS268XWC | ENCGM511JOP | ENCAB976SGG | ENCLB541OLX |
| 1 | 1 | Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCF | ENCBS454VNJ | ENCGM511JOP | ENCAB976SGG | ENCLB048DBS |