Experiment summary for ENCSR767XSF
doi:10.17989/ENCSR767XSF
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- ZNF555
- Biosample summary
- Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF555
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- eGFP-ZNF555 ChIP-seq on human HEK293 cells.
- Nucleic acid type
- DNA
- Size range
- 450-650
- Platform
- Illumina HiSeq 2000, Illumina HiSeq 4000
- Controls
- ENCSR598OXI
- ENCSR300VIY
- ENCSR429LAP
- ENCSR274OGE
- ENCSR342AGU
- ENCSR688NWK
- ENCSR354FNX
- ENCSR157LMX
- ENCSR007GUS
- ENCSR049NDP
- ENCSR110ZVM
- ENCSR123TVS
- ENCSR236FPN
- ENCSR260MAS
- ENCSR278MZO
- ENCSR311DYU
- ENCSR316OQD
- ENCSR361UQO
- ENCSR398UVH
- ENCSR468NLK
- ENCSR499OOH
- ENCSR499QIO
- ENCSR523KUQ
- ENCSR537CWQ
- ENCSR603CJM
- ENCSR679WSJ
- ENCSR736BTL
- ENCSR782QKO
- ENCSR840JVQ
- ENCSR851FFP
- ENCSR860UAT
- ENCSR873PPH
Attribution
ENCODE3 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG006996 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:HEK_eGFP-ZNF555_FRT_ChIP
- Date submitted
- December 9, 2016
- Date released
- March 16, 2017
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Submitter comment
- The archived libraries sequenced on HiSeq 2000 did not meet ENCODE read depth requirements. We have therefore provided more deeply sequenced data on HiSeq 4000.
- Tags
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF555 | ENCBS044VBG | ENCGM638BQF | ENCAB976SGG | ENCLB994FEU |
| 2 | 1 | Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF555 | ENCBS920ICL | ENCGM638BQF | ENCAB976SGG | ENCLB150DNH |