1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. K562

Experiment summary for ENCSR845BCL

doi:10.17989/ENCSR845BCL

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
ZNF639
Biosample summary
Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens ZNF639
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-ZNF639 ChIP-seq on human K562
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Controls

Attribution

ENCODE3 project
Lab
Kevin White, UChicago
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
kevin-white:ZNF639_K562_CRISPR
Date submitted
March 14, 2016
Date released
June 13, 2016
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting H. sapiens ZNF639ENCBS967JDEENCGM559PHPENCAB728YTOENCLB082BKM
21Homo sapiens K562 cell line genetically modified (insertion) using CRISPR targeting H. sapiens ZNF639ENCBS215BGQENCGM559PHPENCAB728YTOENCLB751SOO

Files

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Replicates

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