Deeply Profiled Cell Lines

All Uniform batch growth

Showing 4153 results

Assay

Cell Line (batch identifier)

	intact Hi-C	PRO-cap	in situ Hi-C	GRO-cap	dilution Hi-C	Histone ChIP-seq	Mint-ChIP-seq	TF ChIP-seq	RIP-chip	RIP-seq	eCLIP	iCLIP	ATAC-seq	DNase-seq	FAIRE-seq	GM DNase-seq	MNase-seq	5C	ChIA-PET	Bru-seq	BruChase-seq	BruUV-seq	CAGE	CRISPR RNA-seq	CRISPRi RNA-seq	PAS-seq	RAMPAGE	RNA microarray	RNA-PET	long read RNA-seq	microRNA counts	microRNA-seq	polyA minus RNA-seq	polyA plus RNA-seq	shRNA RNA-seq	siRNA RNA-seq	small RNA-seq	total RNA-seq	DNAme array	MRE-seq	MeDIP-seq	RRBS	WGBS	Repli-seq	DNA-PET	genotyping array	snATAC-seq	WGS	icLASER	icSHAPE	MS-MS
A673	1	1				6		2						2					2	2	2	1								1		1						1									1
ENCBS564CLS	1	1																	2	2	2	1								1		1						1
ENCBS826LEP		1												1					1	2	2	1								1		1						1									1
ENCBS385OLC						6		2

Caco-2	1	1				5	6	2						3				1	2	2	2	1						1		1		1						1	1			1				1	1
ENCBS095ZZD	1	1												1					2	2	2	1								1		1						1
ENCBS072CVQ		1												1						2	2	1								1		1						1									1
ENCBS257JWV							6

Calu3	1	1					6	1						1					1	2	2	1								1		1						1									1
ENCBS992CLK	1	1												1					1	2	2	1								1		1						1
ENCBS961PLX		1												1						2	2	1								1		1						1									1
ENCBS827USO							6

GM23338						13	6	16					1	2													1			1	1	2		1			1	2	1								2
ENCBS368AAA						13		8						1													1				1	1		1			1	1
ENCBS373AAA						13		7						1													1				1	1		1			1	1	1
ENCBS155WDP							5	1						1																1		1						1

HFFc6							6	1						2																1		1						6
ENCBS252IDB																														1		1						6
ENCBS508JLR																														1		1						6
ENCBS249LEB																														1		1						5

HepG2	1		1			15		842	2		124		2	3	1			1	5	2	2	1	6	188				7	2	3	1	2	3	11	243		3	7	3	1		2	2	6		2	3	3		1
ENCBS114ENC								42						1																									2	1		1				1
ENCBS638AAA						1		26										1										1
ENCBS621TAB											26

K562	1	6	1	2		20		821	6	26	164	7	58	10	3	46	1	2	11	2	2	1	9	237	74		1	12	6	4	1	3	3	19	258	34	8	62	3	2	1	1	1	6	3	2	3	4	1	1	6
ENCBS476EKR								126					1																																		2
ENCBS039ENC								67						1			1		2									1											1						3
ENCBS175JIH											51

MCF-7	1					18		159					1	8	3			1	7	2	2	1	3					7	3	1	1	2	1	5		1	7	2	2			5		6		2	3
ENCBS056AAA								19
ENCBS789UPK						13		3
ENCBS967MVZ						13		3

OCI-LY7	1					12		2						1					2	2	2	1					1			1		1					1	2	1				1			1	1
ENCBS149SHY	1																		1	2	2	1								1		1						1									1
ENCBS928AXI																			1	2	2	1								1		1						1
ENCBS699NWP						6		2

PC-3	1					13		3					1	1					2	2	2	1					1			1		1						2									1
ENCBS596CTT						13		3
ENCBS451OVM						12		2
ENCBS388XJL	1												1							2	2	1								1		1						1									1

Panc1	1		1			7		7					1	1					2	2	2	1						1		1		1		1				1	3			2				3	1	1
ENCBS378LMT	1												1						2	2	2	1								1		1						1									1
ENCBS425ENC								5																										1					1			1				2
ENCBS254ODH													1						2	2	2	1

WTC11							6	90					2	1					6	1						1				7		1						10
ENCBS448BXM								15
ENCBS474NOC																										1				7		1						2
ENCBS593PKA																										1				7		1						2

mammary epithelial cell	1		2		1	27		3						4					1	2	2	1	1					2		1		3	1	3			1	2	3	1	1	1	2			3
ENCBS091ENC						12		2																															1				1
ENCBS045GHW						11		2
ENCBS956YQM	1																		1	2	2	1								1		1						1

Deeply Profiled Cell Lines

Showing 4153 results

Assay type

Assay title

Status

Perturbation

Target category

Target of assay

Organism

Biosample classification

Biosample

Organ

Cell

Systems

Life stage

Sex

Biosample treatment

Project

RFA

Genome assembly

Available file types

Platform

Run type

Read length (nt)

Mapped read length (nt)

Library fragment size (nt)

Library material

Library depleted in

Lab

Replication type

Cellular component

Library construction platform

Library construction method

Audit category:

Audit category:

Audit category:

replicates.library.biosample.biosample_ontology.term_id