1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. HCT116

Experiment summary for ENCSR000DTO

doi:10.17989/ENCSR000DTO

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens HCT116
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human HCT-116
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
June 25, 2011
Date released
January 17, 2012
Annotation (gkmsvm-model)
Annotation (physical modeling)
Annotation (BPNet-model)
Submitter comment
Replicate 2,1 of this experiment was previously attributed to biosample ENCBS409ENC but it has since been corrected to the current biosample. Please note that the biosample term has remain unchanged.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens HCT116 cell lineENCBS257IHVENCAB000AFPENCLB114ORS
11Homo sapiens HCT116 cell lineENCBS409ENCENCAB000AFPENCLB725BIP

Files

Filter files

File format
Output type
Replicates

No files to display.