1. Experiments
  2. DNase-seq
  3. Homo sapiens
  4. BJ

Experiment summary for ENCSR000EME

doi:10.17989/ENCSR000EME

Summary

Status
released
Assay
DNase-seq
Biosample summary
Homo sapiens BJ
Biosample Type
cell line
Replication type
isogenic
Description
DNase-seq on human foreskin fibroblast cell
Nucleic acid type
DNA
Fragmentation methods
see document

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
May 4, 2011
Date released
May 4, 2011
Reference Epigenome
ENCSR865DMB 
Annotation (gkmsvm-model)
Annotation (ChromBPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens BJ cell lineENCBS074ENCENCLB417ZZZ
21Homo sapiens BJ cell lineENCBS911DVLENCLB416ZZZ

Files

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Output type
Replicates

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