Experiment summary for ENCSR335JYP
doi:10.17989/ENCSR335JYP
Summary
- Status
- released
- Assay
- HiC (intact Hi-C)
- Biosample summary
- Homo sapiens CD4-positive, alpha-beta T cell male adult (20 years)
- Biosample Type
- primary cell
- Replication type
- unreplicated
- Description
- CD4+ intact Hi-C
- Nucleic acid type
- DNA
- Library starting quantity
- 1000000cells
- Size range
- 100-400
- Fragmentation methods
- chemical (micrococcal nuclease)
- Size selection method
- SPRI beads
- Platform
- Ultima Genomics
Attribution
ENCODE4 project
- Lab
- Erez Aiden, Baylor
- Award
- UM1HG009375 (Erez Aiden, Baylor)
- Project
- ENCODE
- External resources
- Aliases
- erez-aiden:intact-CD4
- Date released
- January 4, 2023
- Annotation (genotyping)
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 2 | Homo sapiens male adult (20 years) CD4-positive, alpha-beta T primary cell | ENCBS296ZES | ENCLB224WKE |
| 1 | 1 | Homo sapiens male adult (20 years) CD4-positive, alpha-beta T primary cell | ENCBS296ZES | ENCLB343YPK |
| 1 | 3 | Homo sapiens male adult (20 years) CD4-positive, alpha-beta T primary cell | ENCBS296ZES | ENCLB987FCG |
| 1 | 4 | Homo sapiens male adult (20 years) CD4-positive, alpha-beta T primary cell | ENCBS296ZES | ENCLB814JNY |