Experiment summary for ENCSR349XKD
doi:10.17989/ENCSR349XKD
Summary
- Status
- released
- Assay
- single-nucleus ATAC-seq (snATAC-seq)
- Biosample summary
- Homo sapiens transverse colon tissue male adult (54 years)
- Biosample Type
- tissue
- Replication type
- unreplicated
- Description
- snATAC-seq of human transverse colon
- Nucleic acid type
- DNA
- Size range
- 200-750
- Lysis method
- [NPB (5% BSA (Sigma), 0.2% IGEPAL-CA630 (Sigma), cOmplete (Roche), 1mM DTT in PBS)]
- Size selection method
- SPRI beads
- Platform
- Illumina NextSeq 500
Attribution
ENCODE3 project
- Lab
- Bing Ren, UCSD
- Award
- U54HG006997 (Bing Ren, UCSD)
- Project
- ENCODE
- Aliases
- bing-ren:ENC-1K2DA-264-SM-CSSDA_snATAC_transverse_colon
- Date submitted
- July 25, 2019
- Date released
- March 23, 2022
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens male adult (54 years) transverse colon tissue | ENCBS609JJK | ENCLB444VLF |