Experiment summary for ENCSR403ZYJ
doi:10.17989/ENCSR403ZYJ
Summary
- Status
- released
- Assay
- ChIA-PET
- Target
- CTCF
- Biosample summary
- Homo sapiens MCF 10A
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIA-PET with MCF10A cell
- Nucleic acid type
- DNA
- Size range
- 300-600
- Extraction method
- SDS
- Fragmentation methods
- sonication (Branson Sonifier 250)
- Size selection method
- BluePippin
- Platform
- Illumina HiSeq 4000, Illumina MiSeq
- Controls
Attribution
ENCODE4 project
- Lab
- Yijun Ruan, JAX
- Award
- UM1HG009409 (Yijun Ruan, JAX)
- Project
- ENCODE
- External resources
- References
- Aliases
- yijun-ruan:ctcf_experiment_MCF10A
- Date submitted
- November 1, 2019
- Date released
- January 25, 2021
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | Homo sapiens MCF 10A cell line | ENCBS406JSW | ENCAB635SXP | ENCLB208HPT |
| 1 | 1 | Homo sapiens MCF 10A cell line | ENCBS283FQS | ENCAB635SXP | ENCLB137PZC |