Experiment summary for ENCSR483UXN
doi:10.17989/ENCSR483UXN
Summary
- Status
- released
- Assay
- long read single-cell RNA-seq (long read scRNA-seq)
- Biosample summary
- Mus musculus strain B6CASTF1/J layer of hippocampus tissue nuclear fraction female postnatal (10 days)
- Biosample Type
- tissue
- Replication type
- isogenic
- Description
- PacBio long-read B6/Cast F1 hippocampus P10 female normal 2k
- Nucleic acid type
- RNA
- Library starting quantity
- 83cells
- Library construction method
- Parse Single Cell Whole Transcriptome Kit
- Strand specificity
- Strand-specific (forward)
- Platform
- Pacific Biosciences Sequel II
Attribution
ENCODE4 project
- Lab
- Ali Mortazavi, UCI
- Award
- UM1HG009443 (Barbara Wold, Caltech)
- Project
- ENCODE
- Aliases
- ali-mortazavi:experiment_pb_lr_B6Cast_hippocampus_P10_female_normal_2k
- Date released
- February 9, 2023
- Organism Development Series
- ENCSR306GUS
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Mus musculus strain B6CASTF1/J female postnatal (10 days) layer of hippocampus tissue nuclear fraction | ENCBS830ZRU | ENCLB680FVT |
| 2 | 1 | Mus musculus strain B6CASTF1/J female postnatal (10 days) layer of hippocampus tissue nuclear fraction | ENCBS600VDJ | ENCLB981JZM |