1. Experiments
  2. small RNA-seq
  3. Homo sapiens
  4. esophagus squamous epithelium

Experiment summary for ENCSR779BVZ

doi:10.17989/ENCSR779BVZ

Summary

Status
released
Assay
small RNA-seq
Biosample summary
Homo sapiens esophagus squamous epithelium tissue female adult (51 years)
Biosample Type
tissue
Replication type
unreplicated
Description
The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Treatments
Tobacco Acid Pyrophosphatase for 1 hour
Nucleic acid type
RNA
RNA integrity number
7.4
Depleted in
rRNA
Size range
<200
Fragmentation methods
see document
Strand specificity
Strand-specific (forward)

Attribution

ENCODE3 project
Lab
Thomas Gingeras, CSHL
Award
U54HG007004 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
April 11, 2016
Date released
June 13, 2016
Annotation (physical modeling)
Tags
Visit collection page for ENTExSearch for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens female adult (51 years) esophagus squamous epithelium tissueENCBS842VSSENCLB234JEI

Files

Filter files

File format
Output type
Replicates

No files to display.