1. Experiments
  2. RNA-seq
  3. Homo sapiens
  4. transverse colon

Experiment summary for ENCSR800WIY

doi:10.17989/ENCSR800WIY

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Homo sapiens transverse colon tissue female adult (53 years)
Biosample Type
tissue
Replication type
unreplicated
Description
The libraries contained in this Experiment come from tissue sub-sections from the transverse colon obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
Nucleic acid type
RNA
RNA integrity number
5.4
Depleted in
rRNA
Size range
>200
Fragmentation methods
see document
Strand specificity
Strand-specific (reverse)
Spike-ins datasets
ENCSR156CIL

Attribution

ENCODE3 project
Lab
Thomas Gingeras, CSHL
Award
U54HG007004 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
January 27, 2016
Date released
February 18, 2016
Annotation (physical modeling)
Tags
Visit collection page for ENTExSearch for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens female adult (53 years) transverse colon tissueENCBS974EYFENCLB214XDA

Files

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