Experiment summary for ENCSR868FGK
doi:10.17989/ENCSR868FGK
Summary
- Status
- released
- Assay
- ATAC-seq
- Biosample summary
- Homo sapiens K562
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- ATAC-seq on human cell line K562
- Nucleic acid type
- DNA
- Size range
- 200-7000
- Fragmentation methods
- chemical (Tn5 transposase)
- Platform
- Illumina NovaSeq 6000
Attribution
ENCODE4 project
- Lab
- Michael Snyder, Stanford
- Award
- UM1HG009442 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:pAS-134, michael-snyder:pAS-K562 bulk ATAC
- Date submitted
- August 1, 2019
- Date released
- August 5, 2020
- Reference Epigenome
- ENCSR612NLL
- Annotation (gkmsvm-model)
- Annotation (ChromBPNet-model)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens K562 cell line | ENCBS049FLD | ENCLB674HYQ |
| 2 | 1 | Homo sapiens K562 cell line | ENCBS030HJI | ENCLB568PER |
| 3 | 1 | Homo sapiens K562 cell line | ENCBS254OQS | ENCLB292FDF |