Experiment summary for ENCSR998BRC
doi:10.17989/ENCSR998BRC
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- hpl-2
- Biosample summary
- Caenorhabditis elegans strain YL474 (lin-35(n745) I; unc-119(ed3) III; vrIs64[pGES-1::HPL-2::GFP FLAG: HPL-2 3-UTR, unc-119 (+)]) whole organism L1 larva at L1 larva starved after bleaching stage genetically modified (insertion) using bombardment targeting C. elegans hpl-2
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq against eGFP-hpl-2 in starved L1 larva worms.
- Nucleic acid type
- DNA
- Size range
- 150-350
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
modENCODE Project
- Lab
- Michael Snyder, Stanford
- Award
- U01HG004267 (Michael Snyder, Stanford)
- Project
- modENCODE
- External resources
- Aliases
- modencode:3834
- Date submitted
- March 31, 2014
- Date released
- March 31, 2014
- Submitter comment
- We had previously erroneously specified the target of this ChIP-seq experiment to be eGFP-lin-35. It is in fact, eGFP-hpl-2 and we have corrected the metadata error.
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain YL474 (lin-35(n745) I; unc-119(ed3) III; vrIs64[pGES-1::HPL-2::GFP FLAG: HPL-2 3-UTR, unc-119 (+)]) mixed sex L1 larva at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans hpl-2 | ENCBS667FNI | ENCGM105SFV | ENCAB435FBQ | ENCLB171XJC |
| 3 | 1 | Caenorhabditis elegans strain YL474 (lin-35(n745) I; unc-119(ed3) III; vrIs64[pGES-1::HPL-2::GFP FLAG: HPL-2 3-UTR, unc-119 (+)]) mixed sex L1 larva at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans hpl-2 | ENCBS526FII | ENCGM105SFV | ENCAB435FBQ | ENCLB231EWT |