Summary for ENCSR184WKQ
Superseded by ENCSR207AHT
Summary
- Status
- archived
- Description
- REMC Epigenome (ENCODE) for HSMM Cell Derived Skeletal Muscle Myotubes Cells using donors/samples:HSMMtube
- Donor diversity
- composite
- Assay
- DNase-seq, ChIP-seq, RRBS
- Target
- H4K20me1, H3K9ac, H3K4me2, H3K4me3, H2AFZ, H3K4me1, H3K9me3, H3K36me3, H3K27me3, H3K27ac, H3K79me2
- Biosample summary
- myotube in vitro differentiated cells
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E121
- External resources
- None submitted
Experiments in ENCSR184WKQ
Experiments
13 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR000ANZ | ChIP-seq | H3K4me3 | ENCDO341XKY | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released | |
| ENCSR000ANW | ChIP-seq | H3K36me3 | ENCDO341XKY | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released | |
| ENCSR000ANX | ChIP-seq | H3K4me1 | ENCDO341XKY | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released | |
| ENCSR000AQM | ChIP-seq | H3K9me3 | ENCDO341XKY | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released | |
| ENCSR000ANV | ChIP-seq | H3K27ac | ENCDO341XKY | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released | |
| ENCSR000ATI | ChIP-seq | H3K27me3 | ENCDO341XKY | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released | |
| ENCSR000ANU | ChIP-seq | H2AFZ | ENCDO341XKY | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released | |
| ENCSR000AOY | ChIP-seq | H3K9ac | ENCDO341XKY | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released | |
| ENCSR000AON | ChIP-seq | H3K79me2 | ENCDO341XKY | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released | |
| ENCSR000AOZ | ChIP-seq | H4K20me1 | ENCDO341XKY | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released | |
| ENCSR000ANY | ChIP-seq | H3K4me2 | ENCDO341XKY | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released | |
| ENCSR000EOP | DNase-seq | ENCDO094AAA | Homo sapiens myotube originated from skeletal muscle myoblast | John Stamatoyannopoulos, UW | released | ||
| ENCSR000DFX | RRBS | ENCDO249AAA | Homo sapiens myotube originated from myoblast | Richard Myers, HAIB | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR000ANT | input library | Homo sapiens myotube originated from skeletal muscle myoblast | Bradley Bernstein, Broad | released |