Showing 25 of 868 results

Report
Number of displayed results:
2550100200
  • MPRA in WTC11
    Elements cloned into the lentiMPRA vector upstream of a minimal promoter, with barcode located in the 5' UTR of the reporter. Elements test neuronal enhancers and promoters.
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR548AQS
    released
  • Control MPRA in WTC11
    Elements cloned into the lentiMPRA vector upstream of a minimal promoter, with barcode located in the 5' UTR of the reporter. Elements test neuronal enhancers and promoters.
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR517VUU
    released
  • pooled clone sequencing in DNA cloning sample
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR257CZP
    released
  • CRISPRi FACS screen in activated CD4-positive, CD25-positive, alpha-beta regulatory T cell with fluorescence activated cell sorting readout of Tnfrsf18
    Mus musculus strain Rosa26-LSL-dCas9-KRAB activated CD4-positive, CD25-positive, alpha-beta regulatory T cell genetically modified (CRISPRi) using CRISPR
    Elements selection method: accessible genome regions
    Tiling modality: peak tiling
    Lab: Tim Reddy, Duke
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR202QXN
    released
  • CRISPRi CRISPR screen in WTC11
    Homo sapiens WTC11, 14 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR380RDA
    released
  • CRISPRi Control screen in WTC11
    Homo sapiens WTC11, 0 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR049FQL
    released
  • pooled clone sequencing in DNA cloning sample
    Lab: Bing Ren, UCSD
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR161WWK
    released
  • proliferation CRISPR screen in glutamatergic neuron
    Homo sapiens glutamatergic neuron, 14 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR800VEG
    released
  • proliferation CRISPR screen in neural progenitor cell
    Homo sapiens neural progenitor cell, 3 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR406XUG
    released
  • proliferation CRISPR screen in WTC11
    Homo sapiens WTC11, 0 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR536LLM
    released
  • pooled clone sequencing in DNA cloning sample
    Elements selection method: accessible genome regions, histone modifications, essential genes
    Lab: Yin Shen, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR699JJN
    released
  • MPRA in SK-N-SH
    Homo sapiens SK-N-SH, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR959NUX
    released
  • MPRA in HepG2
    Homo sapiens HepG2, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR167HAR
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR341GVP
    released
  • MPRA in HepG2
    Homo sapiens HepG2, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR694VUM
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR909JVP
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR820RPI
    released
  • pooled clone sequencing in DNA cloning sample
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR020JTL
    released
  • pooled clone sequencing in DNA cloning sample
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR556IED
    released
  • pooled clone sequencing in DNA cloning sample
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR645FSB
    released
  • pooled clone sequencing in DNA cloning sample
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR335RIS
    released
  • pooled clone sequencing in DNA cloning sample
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR686UKL
    released
  • pooled clone sequencing in DNA cloning sample
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR471OZH
    released
  • MPRA in WTC11
    Elements cloned into the lentiMPRA vector upstream of a minimal promoter, with barcode located in the 5' UTR of the reporter. Elements test potential HepG2, K562, and WTC11 enhancers and promoters of all protein-coding genes.
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR336MKI
    released
  • MPRA in HepG2
    Elements cloned into the lentiMPRA vector upstream of a minimal promoter, with barcode located in the 5' UTR of the reporter. Elements test potential HepG2, K562, and WTC11 enhancers and promoters of all protein-coding genes.
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR405QCT
    released